Physics-informed neural networks for myocardial perfusion MRI quantification

Tracer-kinetic models allow for the quantification of kinetic parameters such as blood flow from dynamic contrast-enhanced magnetic resonance (MR) images. Fitting the observed data with multi-compartment exchange models is desirable, as they are physiologically plausible and resolve directly for blood flow and microvascular function… However, the reliability of model fitting is limited by the low signal-to-noise ratio, temporal resolution, and acquisition length. This may result in inaccurate parameter estimates. This study introduces physics-informed neural networks (PINNs) as a means to […]

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Neural Representations for Modeling Variation in English Speech

Variation in speech is often represented and investigated using phonetic transcriptions, but transcribing speech is time-consuming and error prone. To create reliable representations of speech independent from phonetic transcriptions, we investigate the extraction of acoustic embeddings from several self-supervised neural models… We use these representations to compute word-based pronunciation differences between non-native and native speakers of English, and evaluate these differences by comparing them with human native-likeness judgments. We show that Transformer-based speech representations lead to significant performance gains over […]

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Interpreting U-Nets via Task-Driven Multiscale Dictionary Learning

U-Nets have been tremendously successful in many imaging inverse problems. In an effort to understand the source of this success, we show that one can reduce a U-Net to a tractable, well-understood sparsity-driven dictionary model while retaining its strong empirical performance… We achieve this by extracting a certain multiscale convolutional dictionary from the standard U-Net. This dictionary imitates the structure of the U-Net in its convolution, scale-separation, and skip connection aspects, while doing away with the nonlinear parts. We show […]

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Match Them Up: Visually Explainable Few-shot Image Classification

Few-shot learning (FSL) approaches are usually based on an assumption that the pre-trained knowledge can be obtained from base (seen) categories and can be well transferred to novel (unseen) categories. However, there is no guarantee, especially for the latter part… This issue leads to the unknown nature of the inference process in most FSL methods, which hampers its application in some risk-sensitive areas. In this paper, we reveal a new way to perform FSL for image classification, using visual representations […]

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No Subclass Left Behind: Fine-Grained Robustness in Coarse-Grained Classification Problems

In real-world classification tasks, each class often comprises multiple finer-grained “subclasses.” As the subclass labels are frequently unavailable, models trained using only the coarser-grained class labels often exhibit highly variable performance across different subclasses… This phenomenon, known as hidden stratification, has important consequences for models deployed in safety-critical applications such as medicine. We propose GEORGE, a method to both measure and mitigate hidden stratification even when subclass labels are unknown. We first observe that unlabeled subclasses are often separable in […]

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An Open Framework for Remote-PPG Methods and their Assessment

This paper presents a comprehensive framework for studying methods of pulse rate estimation relying on remote photoplethysmography (rPPG). There has been a remarkable development of rPPG techniques in recent years, and the publication of several surveys too, yet a sound assessment of their performance has been overlooked at best, whether not undeveloped… The methodological rationale behind the framework we propose is that in order to study, develop and compare new rPPG methods in a principled and reproducible way, the following […]

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Matplotlib: Change Scatter Plot Marker Size

Introduction Matplotlib is one of the most widely used data visualization libraries in Python. Much of Matplotlib’s popularity comes from its customization options – you can tweak just about any element from its hierarchy of objects. In this tutorial, we’ll take a look at how to change the marker size in a Matplotlib scatter plot. Import Data We’ll use the World Happiness dataset, and compare the Happiness Score against varying features to see what influences perceived happiness in the world: […]

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How to Check if List is Empty in Python

Introduction Lists are one of the four most commonly used data structures provided by Python. Its functionality, extensibility, and ease of use make it useful for implementing various types of functionalities. Python lists have a few interesting characteristics: Mutability – meaning it can change, which means it allows us to easily add and delete entries from it. This is the main difference between Python lists and tuples Homogeneity – meaning all elements within one list have to be of the […]

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