Pipeline for chemical image-to-text competition
BMS-Molecular-Translation Pipeline for chemical image-to-text competition. This is a pipeline for Bristol-Myers Squibb – Molecular Translation by Vadim Timakin and Maksim Zhdanov. We got bronze medals in this competition. Significant part of code was originated from Y.Nakama’s notebook This competition was about image-to-text translation of images with molecular skeletal strucutures to InChI chemical formula identifiers. InChI=1S/C16H13Cl2NO3/c1-10-2-4-11(5-3-10)16(21)22-9-15(20)19-14-8-12(17)6-7-13(14)18/h2-8H,9H2,1H3,(H,19,20) Solution General Encoder-Decoder concept Most participants used CNN encoder to acquire features with decoder (LSTM/GRU/Transformer) to get text sequences. That’s a casual approach to […]
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