CBMPy Metadraft: a flexible and extensible genome-scale model reconstruction tool
CBMPy Metadraft: a flexible and extensible, GUI-based genome-scale model reconstruction tool that supports multiple Systems Biology standards.
MetaDraft version 0.9.2 now defaults to the 2019-1 template library, if you are working directly in a cloned repository please initialise the new template library:
cd cbmpy-metadraft
git submodule update --init --remote -- modeldb/2019-1/
If you want to switch back to the 2018-1 library and results please edit the _metadraft.cfg file and change the value of the "metadraft_db_version" key to "2018-1" (it is currently set to "2019-1").
Installation and system dependencies
NEW: The MetaDraft User Guide is now available online and for download from the MetaDraft website.
System dependencies
MetaDraft requires working versions of Python, Perl, Java and NCBI Blast2. Once you have downloaded MetaDraft and it’s Python dependencies, please run the system test script